Aierken D, Joseph JA. 2023. Accelerated simulations of RNA phase separation: a systematic study of non-redundant tandem repeats. bioRxiv. Referenced from www.biorxiv.org: Accelerated simulations of RNA phase separation: a systematic study of non-redundant tandem repeats.

Chew P, Joseph J, Collepardo-Guevara R, Reinhardt A. 2023. Thermodynamic origins of two-component multiphase condensates of proteins. Chemical Science. doi:10.1039/D2SC05873A.

Garaizar A, Espinosa J, Joseph J, Collepardo-Guevara R. 2022. Kinetic interplay between droplet maturation and coalescence modulates shape of aged protein condensates. Scientific reports. 12(1):4390. doi:10.1038/s41598-022-08130-2.

Garaizar A, Espinosa J, Joseph J, Krainer G, Shen Y, Knowles T, Collepardo-Guevara R. 2022. Aging can transform single-component protein condensates into multiphase architectures. Proceedings of the National Academy of Sciences of the United States of America. 119(26):e2119800119. doi:10.1073/pnas.2119800119.

Sanchez-Burgos I, Espinosa J, Joseph J, Collepardo-Guevara R. 2022. RNA length has a non-trivial effect in the stability of biomolecular condensates formed by RNA-binding proteins. PLoS computational biology. 18(2):e1009810. doi:10.1371/journal.pcbi.1009810.

Welsh T, Krainer G, Espinosa J, Joseph J, Sridhar A, Jahnel M, Arter W, Saar K, Alberti S, Collepardo-Guevara R, et al. 2022. Surface Electrostatics Govern the Emulsion Stability of Biomolecular Condensates. Nano letters. 22(2):612–621. doi:10.1021/acs.nanolett.1c03138.

Farr S, Woods E, Joseph J, Garaizar A, Collepardo-Guevara R. 2021. Nucleosome plasticity is a critical element of chromatin liquid-liquid phase separation and multivalent nucleosome interactions. Nature communications. 12(1):2883. doi:10.1038/s41467-021-23090-3.

Joseph J, Espinosa J, Sanchez-Burgos I, Garaizar A, Frenkel D, Collepardo-Guevara R. 2021. Thermodynamics and kinetics of phase separation of protein-RNA mixtures by a minimal model. Biophysical journal. 120(7):1219–1230. doi:10.1016/j.bpj.2021.01.031.

Joseph J, Reinhardt A, Aguirre A, Chew P, Russell K, Espinosa J, Garaizar A, Collepardo-Guevara R. 2021. Physics-driven coarse-grained model for biomolecular phase separation with near-quantitative accuracy. Nature computational science. 1(11):732–743. doi:10.1038/s43588-021-00155-3.

Krainer G, Welsh T, Joseph J, Espinosa J, Wittmann S, de Csilléry E, Sridhar A, Toprakcioglu Z, Gudiškytė G, Czekalska M, et al. 2021. Reentrant liquid condensate phase of proteins is stabilized by hydrophobic and non-ionic interactions. Nature communications. 12(1):1085. doi:10.1038/s41467-021-21181-9.

Sanchez-Burgos I, Espinosa J, Joseph J, Collepardo-Guevara R. 2021. Valency and Binding Affinity Variations Can Regulate the Multilayered Organization of Protein Condensates with Many Components. Biomolecules. 11(2). doi:10.3390/biom11020278.

Sanchez-Burgos I, Joseph J, Collepardo-Guevara R, Espinosa J. 2021. Size conservation emerges spontaneously in biomolecular condensates formed by scaffolds and surfactant clients. Scientific reports. 11(1):15241. doi:10.1038/s41598-021-94309-y.

Espinosa J, Joseph J, Sanchez-Burgos I, Garaizar A, Frenkel D, Collepardo-Guevara R. 2020. Liquid network connectivity regulates the stability and composition of biomolecular condensates with many components. Proceedings of the National Academy of Sciences of the United States of America. 117(24):13238–13247. doi:10.1073/pnas.1917569117.

Joseph J, Chakraborty D, Wales D. 2019. Energy Landscape for Fold-Switching in Regulatory Protein RfaH. Journal of chemical theory and computation. 15(1):731–742. doi:10.1021/acs.jctc.8b00912.

Röder K, Joseph JA, Husic BE, Wales DJ. 2019. Energy Landscapes for Proteins: From Single Funnels to Multifunctional Systems. Advanced Theory and Simulations. 2:1800175. Referenced from onlinelibrary.wiley.com: Energy Landscapes for Proteins: From Single Funnels to Multifunctional Systems.

Joseph J, Wales D. 2018. Intrinsically Disordered Landscapes for Human CD4 Receptor Peptide. The journal of physical chemistry. B. 122(50):11906–11921. doi:10.1021/acs.jpcb.8b08371.

Joseph J, Röder K, Chakraborty D, Mantell R, Wales D. 2017. Exploring biomolecular energy landscapes. Chemical communications (Cambridge, England). 53(52):6974–6988. doi:10.1039/c7cc02413d.

Joseph J, Whittleston C, Wales D. 2016. Structure, Thermodynamics, and Folding Pathways for a Tryptophan Zipper as a Function of Local Rigidification. Journal of chemical theory and computation. 12(12):6109–6117.

Joseph J, McDowell S. 2015. Comparative computational study of model halogen-bonded complexes of FKrCl. The journal of physical chemistry. A. 119(11):2568–77. doi:10.1021/jp5091262.

McDowell SA, Joseph JA. 2015. A comparative study of model halogen-bonded, π-hole-bonded and cationic complexes involving NCX AND H2O (X = F, Cl, Br). Molecular Physics. 113:16–21. doi:10.1080/00268976.2014.939116. Referenced from doi.org: A comparative study of model halogen-bonded, π-hole-bonded and cationic complexes involving NCX AND H2O (X = F, Cl, Br).

McDowell S, Joseph JA. 2015. Interplay of Hydrogen, Halogen, Lithium and Beryllium Bonds in Complexes of Thiirane. In: Scheiner S, editor. Cham: Springer International Publishing. pp. 357–389. Referenced from doi.org: Interplay of Hydrogen, Halogen, Lithium and Beryllium Bonds in Complexes of Thiirane.

McDowell S, Joseph J. 2014. Variation of sigma-hole magnitude with M valence electron population in MX(n)Y(4-n) molecules (n = 1-4; M = C, Si, Ge; X, Y = F, Cl, Br). Physical chemistry chemical physics : PCCP. 16(2):669–71. doi:10.1039/c3cp53738b.

McDowell SA, Joseph JA. 2014. Destabilization of the halogen bond in complexes of protonated NCX (X=F, Cl, Br) molecules. Chemical Physics Letters. 603:37–40. Referenced from www.sciencedirect.com: Destabilization of the halogen bond in complexes of protonated NCX (X=F, Cl, Br) molecules.

McDowell S, Joseph J. 2014. The effect of atomic ions on model σ-hole bonded complexes of AH3Y (A = C, Si, Ge; Y = F, Cl, Br). Physical chemistry chemical physics : PCCP. 16(22):10854–60. doi:10.1039/c4cp01074d.

McDowell S, Joseph J. 2013. Cooperative effects in novel LiF∕HF⋯LiF⋯XF (X = F, Cl, Br) clusters. The Journal of chemical physics. 138(16):164313. doi:10.1063/1.4801863.

McDowell S, Joseph J. 2012. Cooperative effects of noncovalent bonds to the Br atom of halogen-bonded H3N.BrZ and HCN.BrZ (Z = F, Br) complexes. The Journal of chemical physics. 137(7):074310. doi:10.1063/1.4745838.

McDowell S, Joseph J. 2012. Communication: An unusual halogen-bonding motif: the LiBr···BrF dimer as a model system. The Journal of chemical physics. 137(17):171103. doi:10.1063/1.4766932.